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About: http://www.geneontology.org/formats/oboInOwl Goto Sponge NotDistinct Permalink

An Entity of Type : owl:Ontology, within Data Space : covidontheweb.inria.fr associated with source document(s)

This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi

Attributes	Values
type	Ontology
label
comment	This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties
topic	has_subset has_version has_date obsolete_property has_URI database_cross_reference definition subset synonym has_default_namespace saved_by synonym_type subset_property has_broad_synonym database_cross_reference has_exact_synonym has_related_synonym in_subset Obsolete concept (EDAM) synonym_type_property consider has_alternative_id has_narrow_synonym has_obo_namespace has_synonym_type has synonym obo:this obo:DataCreation obo:rdf_load_html_response has_definition is_cyclic replaced_by The textual definition of the current term. There must be zero or one instances of this tag per term description oboInOwl:cjm URL:http://www.obofoundry.org/wiki/index.php/Definitions pseudo-class. in the oboInOwl translation, all obsolete classes are subclasses of this class. Note that this is not a metaclass oboInOwl:cjm A grouping of terms from an ontology or ontologies. Note that this is not a metaclass - classes are linked to subsets via oboInOwl:inSubset oboInOwl:cjm view partition slim GO-slim oboFormat:subsetdef An instance of synonym usage. synonym instances are linked to classes via oboInOwl:has*Synonym properties oboInOwl:cjm pseudo-property. in the oboInOwl translation, all obsolete relations are subProperties of this class oboInOwl:cjm Gives a term which may be an appropriate substitute for an obsolete term, but needs to be looked at carefully by a human expert before the replacement is done oboInOwl:cjm oboFormat:consider An alternative identifier for this class; should follow ID syntax. These can result from class merges oboInOwl:cjm oboFormat:alt_id An alias in which the alias is broader than the primary class name. Example: cell division is a broad synonym of cytokinesis oboInOwl:GOC oboFormat:broad_synonym oboFormat:date oboFormat:xref oboFormat:default-namespace a relation between a class and an instance of a oboInOwl:Definition oboInOwl:cjm oboFormat:def An alias in which the alias exhibits true synonymy. Example: ornithine cycle is an exact synonym of urea cycle oboInOwl:GOC oboFormat:exact_synonym An alias in which the alias is narrower than the primary class name. Example: pyrimidine-dimer repair by photolyase is a narrow synonym of photoreactive repair oboInOwl:GOC oboFormat:narrow_synonym A relation between a class and an OBO namespace string. OBO namespaces are to be distinguished from IDspaces; for example, biological_process is a namespace, GO is an idspace. oboInOwl:GOC oboFormat:namespace A relation between a class and an alias term. oboInOwl:GOC oboFormat:synonym An alias in which the alias is related the primary class name, but not necessarily broader or narrower. Example: cytochrome bc1 complex is a related synonym of ubiquinol-cytochrome-c reductase activity; virulence is a related synonym of pathogenesis oboInOwl:GOC oboFormat:related_synonym relation between an ontology and a oboInOwl:Subset, indicating classes in the ontology belong to the subset oboInOwl:cjm URL:http://www.geneontology.org/GO.usage.shtml#type oboFormat:version relation between a class and a oboInOwl:Subset, indicating the class belongs (is a member of) the subset oboInOwl:cjm oboFormat:subset Gives a term which replaces an obsolete term. The value is the id of the replacement term. The value of this tag can safely be used to automatically reassign links to an obsolete term. The replaced_by tag may only be specified for obsolete terms. A single obsolete term may have more than one replaced_by tag. This tag can be used in conjunction with the consider tag. oboInOwl:cjm oboFormat:replaced_by oboFormat:saved_by nodeID://b663863599 oboFormat:is_cyclic This annotation property groups all subsets declared in the ontology oboInOwl:GOC This annotation property groups all synonym types declared in the ontology oboInOwl:GOC nodeID://b663863605

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