About: Outbreak of porcine epidemic diarrhoea virus (PEDV) in Abruzzi region, central‐Italy

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About: Outbreak of porcine epidemic diarrhoea virus (PEDV) in Abruzzi region, central‐Italy Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Outbreak of porcine epidemic diarrhoea virus (PEDV) in Abruzzi region, central‐Italy
Creator	Lorusso, Alessio Marcacci, Maurilia Zaccaria, Guendalina Cito, Francesca Cerella, Angelo Forzan, Mario Orsini, Massimiliano Pizzurro, Federica Spedicato, Massimo D'alterio, Nicola
Source	Medline; PMC
abstract	Here we report and characterize a porcine epidemic diarrhea (PED) outbreak which occurred in a swine fattening farm in the province of Teramo, Abruzzi region (central Italy), in January 2016. PED virus (PEDV) identification was determined by real‐time RT‐PCR performed on RNAs purified from fecal samples collected from two symptomatic pigs. Whole genome sequence (PEDV 1842/2016) was also obtained by next generation sequencing straight from RNA purified from one fecal sample. Genome comparison with extant global PEDV strains revealed a high nucleotide identity with recently reported European and American S‐INDEL PEDVs. Efficient sequencing, share of genomic data combined with the implementation of epidemiological tools would be the ideal approach for study and analysis of transboundary infectious diseases as PED.
has issue date	2017-12-18(xsd:dateTime)
bibo:doi	10.1002/vms3.88
bibo:pmid	29851308
has license	cc-by
sha1sum (hex)	de652a9f987a68568c425859c662ea8d2325631c
schema:url	https://doi.org/10.1002/vms3.88
resource representing a document's title	Outbreak of porcine epidemic diarrhoea virus (PEDV) in Abruzzi region, central‐Italy
has PubMed Central identifier	PMC5979762
has PubMed identifier	29851308
schema:publication	Vet Med Sci
resource representing a document's body	covid:de652a9f987a68568c425859c662ea8d2325631c#body_text
is schema:about of	named entity 'Teramo' named entity 'extant' named entity '2016' named entity 'Abruzzi' named entity 'virus' named entity 'region' named entity 'ITALY' named entity 'EXTANT' named entity 'TOOLS' named entity 'REGION' named entity 'PERFORMED' named entity 'GENOMIC DATA' named entity 'IDENTIFICATION' named entity 'IMPLEMENTATION' named entity 'RECENTLY' named entity 'EUROPEAN' named entity 'WHOLE GENOME' named entity 'OBTAINED BY' named entity 'IDENTITY' named entity 'STUDY' named entity 'RNA' named entity 'GLOBAL' named entity 'RNAS' named entity 'PED' named entity 'NUCLEOTIDE' named entity 'PEDV' named entity 'PIGS' named entity 'HIGH' named entity 'SEQUENCING' named entity 'INFECTIOUS DISEASES' named entity 'FARM' named entity 'SAMPLE' named entity 'SHARE' named entity 'COMBINED' named entity 'GENOME COMPARISON' named entity 'VIRUS' named entity 'ANALYSIS' named entity 'PROVINCE OF TERAMO' named entity 'REVEALED' named entity 'DETERMINED BY' named entity 'JANUARY' named entity 'COLLECTED' named entity 'SYMPTOMATIC' named entity 'PORCINE EPIDEMIC DIARRHOEA VIRUS' named entity 'APPROACH' named entity 'REGION' named entity 'ITALY' named entity 'CENTRAL' named entity 'OUTBREAK' named entity 'OUTBREAK' named entity 'AMERICAN' named entity 'EFFICIENT' named entity 'HERE' named entity 'OCCURRED' named entity 'SAMPLES' named entity 'REAL-TIME RT-PCR' named entity 'PORCINE EPIDEMIC DIARRHEA' named entity 'STRAIGHT' named entity 'IDEAL' named entity 'REPORTED' named entity 'FECAL' named entity 'PURIFIED' named entity 'STRAINS' named entity 'GENOME SEQUENCE' named entity 'INDEL' named entity 'NEXT GENERATION SEQUENCING' named entity 'EPIDEMIOLOGICAL' named entity 'FATTENING' named entity 'REPORT' named entity 'SWINE' named entity 'share' named entity 'data'

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