About: Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein

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About: Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
Creator	Hou, Ming-Hon Lee, Cheng-Chung Chen, I-Jung Chou, Chia-Cheng Kan, Lou-Sing Liu, Chia-Ling
Source	Medline; PMC
abstract	The N-terminal domain of nucleocapsid protein from human coronavirus OC43 (HCoV-OC43 N-NTD) mostly contains positively charged residues and has been identified as being responsible for RNA binding during ribonucleocapsid formation in the coronavirus. In this study, the crystallization and preliminary crystallographic analysis of HCoV-OC43 N-NTD (amino acids 58–195) with a molecular weight of 20 kDa are reported. HCoV-OC43 N-NTD was crystallized at 293 K using PEG 1500 as a precipitant and a 99.9% complete native data set was collected to 1.7 Å resolution at 100 K with an overall R (merge) of 5.0%. The crystals belonged to the hexagonal space group P6(5), with unit-cell parameters a = 81.57, c = 42.87 Å. Solvent-content calculations suggest that there is likely to be one subunit of N-NTD in the asymmetric unit.
has issue date	2010-06-24(xsd:dateTime)
bibo:doi	10.1107/s1744309110017616
bibo:pmid	20606281
has license	bronze-oa
sha1sum (hex)	cff88ab0884b176afb385c89cb0e3ac1c7197544
schema:url	https://doi.org/10.1107/s1744309110017616
resource representing a document's title	Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
has PubMed Central identifier	PMC2898469
has PubMed identifier	20606281
schema:publication	Acta Crystallographica Section F Structural Biology and Crystallization Communications
resource representing a document's body	covid:cff88ab0884b176afb385c89cb0e3ac1c7197544#body_text
is schema:about of	named entity 'PRELIMINARY' named entity 'HCoV-OC43' named entity 'subunit' named entity 'OC43' named entity 'HCoV-OC43' named entity 'LIKELY' named entity 'COMPLETE' named entity 'PROTEIN ' named entity 'SUBUNIT' named entity 'IDENTIFIED' named entity 'ACIDS' named entity 'MERGE' named entity 'HUMAN CORONAVIRUS OC43' named entity 'ANALYSIS' named entity 'STRUCTURAL BIOLOGY' named entity 'STUDY' named entity 'HEXAGONAL' named entity 'N-TERMINAL ' named entity 'NTD' named entity 'CONTENT' named entity 'NUCLEOCAPSID PROTEIN' named entity 'CRYSTALLIZATION' named entity 'HUMAN CORONAVIRUS OC43' named entity 'COMMUNICATIONS' named entity 'N-TERMINAL ' named entity 'REPORTED' named entity 'COLLECTED' named entity '100' named entity '293' named entity 'DOMAIN' named entity 'DATA SET' named entity 'SUGGEST' named entity 'NUCLEOCAPSID PROTEIN' named entity 'RNA BINDING' named entity 'KDA' named entity 'RESPONSIBLE' named entity 'BEING' named entity 'OC43' named entity 'OVERALL' named entity 'X-RAY DIFFRACTION ANALYSIS' named entity 'HCOV-OC43' named entity 'USING' named entity 'DOMAIN' named entity 'CRYSTALLIZATION' named entity 'PRELIMINARY' named entity '1.7' named entity 'UNIT' named entity '99.9' named entity 'FORMATION' named entity 'NATIVE' named entity 'MOLECULAR WEIGHT' named entity 'SPACE GROUP' named entity 'PEG 1500' named entity 'CORONAVIRUS' named entity 'CELL' named entity 'CONTAINS' named entity 'PRECIPITANT' named entity 'SOLVENT' named entity 'CRYSTALLIZED' named entity 'RESOLUTION' named entity '195' named entity 'POSITIVELY CHARGED' named entity 'CRYSTALS' named entity 'ASYMMETRIC' named entity 'PARAMETERS' covid:arg/cff88ab0884b176afb385c89cb0e3ac1c7197544 named entity 'molecular weight' named entity 'coronavirus' named entity 'DNA fragments' named entity 'lysed' named entity 'imidazole' named entity 'C-terminal' named entity 'SPring-8' named entity 'protein' named entity 'HCoV-OC43' named entity 'protein'

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