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About:
Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19
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An Entity of Type :
schema:ScholarlyArticle
, within Data Space :
covidontheweb.inria.fr
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Type:
Academic Article
research paper
schema:ScholarlyArticle
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type
Academic Article
research paper
schema:ScholarlyArticle
isDefinedBy
Covid-on-the-Web dataset
has title
Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19
Creator
Kim, Sung-Han
Shin, Eui-Cheol
Kwon, Ji-Soo
Ahn, Jin
Choi, Jun
Jeong, Hye
Jeong, Su
Lee, Heung
Lee, Jeong
Park, Sung
Choi,
Choi, Baekgyu
Jung, Inkyung
Lee, Hoyoung
Nam, Su
Park, Seongwan
Park, Su-Hyung
Sa, Moa
Seong, Jin
Source
Medline; PMC
abstract
Although most SARS-CoV-2-infected individuals experience mild coronavirus disease 2019 (COVID-19), some patients suffer from severe COVID-19, which is accompanied by acute respiratory distress syndrome and systemic inflammation. To identify factors driving severe progression of COVID-19, we performed single-cell RNA-seq using peripheral blood mononuclear cells (PBMCs) obtained from healthy donors, patients with mild or severe COVID-19, and patients with severe influenza. Patients with COVID-19 exhibited hyper-inflammatory signatures across all types of cells among PBMCs, particularly up-regulation of the TNF/IL-1β-driven inflammatory response as compared to severe influenza. In classical monocytes from patients with severe COVID-19, type I IFN response co-existed with the TNF/IL-1β-driven inflammation, and this was not seen in patients with milder COVID-19. Interestingly, we documented type I IFN-driven inflammatory features in patients with severe influenza as well. Based on this, we propose that the type I IFN response plays a pivotal role in exacerbating inflammation in severe COVID-19.
has issue date
2020-07-10
(
xsd:dateTime
)
bibo:doi
10.1126/sciimmunol.abd1554
bibo:pmid
32651212
has license
cc-by
sha1sum (hex)
c718ef0cd868b60f5e7cd2d63043f69248efaccc
schema:url
https://doi.org/10.1126/sciimmunol.abd1554
resource representing a document's title
Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19
has PubMed Central identifier
PMC7402635
has PubMed identifier
32651212
schema:publication
Sci Immunol
resource representing a document's body
covid:c718ef0cd868b60f5e7cd2d63043f69248efaccc#body_text
is
schema:about
of
named entity 'monocytes'
named entity 'scRNA-seq'
named entity 'inflammation'
named entity 'inflammatory response'
named entity 'cytokines'
named entity 'Invitrogen'
named entity 'up-regulated'
named entity 'R&D'
named entity 'disease-specific'
named entity 'cell type'
named entity 'monocytes'
named entity 'Middle East respiratory syndrome'
named entity 'COVID'
named entity 'cytokine'
named entity 'Gene Ontology'
named entity 'post-mortem'
named entity 'antiviral activity'
named entity 'infection'
named entity 'intracellular'
named entity 'monocytes'
named entity 'cell type'
named entity 'Live/Dead'
named entity 'cell cluster'
named entity 'spreading globally'
named entity 'multiplexed'
named entity 'UMIs'
named entity 'COVID'
named entity 'COVID-19'
named entity 'STRING analysis'
named entity 'up-regulation'
named entity 'staining'
named entity 'influenza'
named entity 'perturbation analysis'
named entity 'COVID'
named entity 'PBMCs'
named entity 'Kolmogorov-Smirnov test'
named entity 'coronavirus disease 2019'
named entity 'lung'
named entity 'CD8 +'
named entity 'Welch's t test'
named entity 'IFITM3'
named entity 'Seoul'
named entity 'SARS-CoV-2'
named entity 'immune cells'
named entity 'scRNA-seq'
named entity 'COVID'
named entity 'gene expression'
named entity 'COVID-19'
named entity 'COVID'
named entity 'sequenced'
named entity 'COVID'
named entity 'inflammatory response'
named entity 'PBMCs'
named entity 'antibodies'
named entity 'up-regulated'
named entity 'COVID'
named entity 'IFN'
named entity 'Sweden'
named entity 'lung'
named entity 'cell cluster'
named entity 'up-regulated'
named entity 'CD3'
named entity 'IFN-γ'
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