About: Discovery and Characterization of Novel Bat Coronavirus Lineages from Kazakhstan

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About: Discovery and Characterization of Novel Bat Coronavirus Lineages from Kazakhstan Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Discovery and Characterization of Novel Bat Coronavirus Lineages from Kazakhstan
Creator	Mendenhall, Ian Orynbayev, Mukhit Smith, Gavin Strochkov, Vitaliy Su, Yvonne Sultankulova, Kulyaisan Kerimbayev, Aslan Kopeyev, Syrym
Source	Medline; PMC
abstract	Coronaviruses are positive-stranded RNA viruses that infect a variety of hosts, resulting in a range of symptoms from gastrointestinal illness to respiratory distress. Bats are reservoirs for a high diversity of coronaviruses, and focused surveillance detected several strains genetically similar to MERS-coronavirus, SARS-coronavirus, and the human coronaviruses 229E and NL63. The bat fauna of central Asia, which link China to eastern Europe, are relatively less studied than other regions of the world. Kazakhstan is the world’s ninth largest country; however, little is understood about the prevalence and diversity of bat-borne viruses. In this study, bat guano was collected from bat caves in three different sites of southern Kazakhstan that tested positive for coronaviruses. Our phylogenetic reconstruction indicates these are novel bat coronaviruses that belong to the genus Alphacoronavirus. In addition, two distinct lineages of Kazakhstan bat coronaviruses were detected. Both lineages are closely related to bat coronaviruses from China, France, Spain, and South Africa, suggesting that co-circulation of coronaviruses is common in multiple bat species with overlapping geographical distributions. Our study highlights the need for collaborative efforts in understudied countries to increase integrated surveillance capabilities toward better monitoring and detection of infectious diseases.
has issue date	2019-04-17(xsd:dateTime)
bibo:doi	10.3390/v11040356
bibo:pmid	30999711
has license	cc-by
sha1sum (hex)	bc50818627fbe2bfdbd0b471da603d88ca9e54f4
schema:url	https://doi.org/10.3390/v11040356
resource representing a document's title	Discovery and Characterization of Novel Bat Coronavirus Lineages from Kazakhstan
has PubMed Central identifier	PMC6521082
has PubMed identifier	30999711
schema:publication	Viruses
resource representing a document's body	covid:bc50818627fbe2bfdbd0b471da603d88ca9e54f4#body_text
is schema:about of	named entity 'Spain' named entity 'sites' named entity 'Kazakhstan' named entity 'China' named entity 'RNA' named entity 'addition' named entity 'strains' named entity 'Novel' covid:arg/bc50818627fbe2bfdbd0b471da603d88ca9e54f4 named entity 'DETECTION' named entity 'RESERVOIRS' named entity 'BATS' named entity 'WORLD' named entity 'HUMAN' named entity '229E' named entity 'COUNTRIES' named entity 'BETTER' named entity 'SYMPTOMS' named entity 'ABOUT' named entity 'LITTLE' named entity 'GENUS ALPHACORONAVIRUS' named entity 'CENTRAL ASIA' named entity 'COMMON' named entity 'DISTRIBUTIONS' named entity 'VIRUSES' named entity 'VARIETY' named entity 'RNA VIRUSES' named entity 'COLLECTED' named entity 'KAZAKHSTAN' named entity 'SOUTH AFRICA' named entity 'PHYLOGENETIC RECONSTRUCTION' named entity 'COUNTRY' named entity 'DISTINCT' named entity 'RESPIRATORY DISTRESS' named entity 'COLLABORATIVE' named entity 'STRAINS' named entity 'CIRCULATION' named entity 'SPAIN' named entity 'NOVEL' named entity 'PREVALENCE' named entity 'INFECTIOUS DISEASES' named entity 'SPECIES' named entity 'CORONAVIRUS' named entity 'MONITORING' named entity 'FOCUSED' named entity 'INTEGRATED' named entity 'MERS' named entity 'HIGH' named entity 'BORNE' named entity 'LARGEST' named entity 'REGIONS' named entity 'CAVES' named entity 'DIVERSITY' named entity 'FRANCE' named entity 'SOUTHERN' named entity 'CORONAVIRUSES' named entity '27S' named entity 'THESE' named entity 'LINK' named entity 'OVERLAPPING' named entity 'STUDY' named entity 'NOVEL' named entity 'DISCOVERY' named entity 'GEOGRAPHICAL' named entity 'TO INCREASE' named entity 'GASTROINTESTINAL' named entity 'NINTH' named entity 'OUR' named entity 'SURVEILLANCE' named entity 'FAUNA' named entity 'CHINA' named entity 'DETECTED' named entity 'RESULTING IN' named entity 'EASTERN EUROPE'

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