About: Single Stranded DNA Viruses Associated with Capybara Faeces Sampled in Brazil

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About: Single Stranded DNA Viruses Associated with Capybara Faeces Sampled in Brazil Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Single Stranded DNA Viruses Associated with Capybara Faeces Sampled in Brazil
Creator	Varsani, Arvind Lacorte, Cristiano Schmidlin, Kara Fontenele, Rafaela Lamas, Natalia Ribeiro, Simone
Source	Medline; PMC
abstract	Capybaras (Hydrochoerus hydrochaeris), the world’s largest rodents, are distributed throughout South America. These wild herbivores are commonly found near water bodies and are well adapted to rural and urban areas. There is limited information on the viruses circulating through capybaras. This study aimed to expand the knowledge on the viral diversity associated with capybaras by sampling their faeces. Using a viral metagenomics approach, we identified diverse single-stranded DNA viruses in the capybara faeces sampled in the Distrito Federal, Brazil. A total of 148 complete genomes of viruses in the Microviridae family were identified. In addition, 14 genomoviruses (family Genomoviridae), a novel cyclovirus (family Circoviridae), and a smacovirus (family Smacoviridae) were identified. Also, 37 diverse viruses that cannot be assigned to known families and more broadly referred to as unclassified circular replication associated protein encoding single-stranded (CRESS) DNA viruses were identified. This study provides a snapshot of the viral diversity associated with capybaras that may be infectious to these animals or associated with their microbiota or diet.
has issue date	2019-08-02(xsd:dateTime)
bibo:doi	10.3390/v11080710
bibo:pmid	31382446
has license	cc-by
sha1sum (hex)	b4f6baab270ef953349d05c6f2936803c92bf4b4
schema:url	https://doi.org/10.3390/v11080710
resource representing a document's title	Single Stranded DNA Viruses Associated with Capybara Faeces Sampled in Brazil
has PubMed Central identifier	PMC6723397
has PubMed identifier	31382446
schema:publication	Viruses
resource representing a document's body	covid:b4f6baab270ef953349d05c6f2936803c92bf4b4#body_text
is schema:about of	named entity 'viral' named entity 'commonly' named entity 'water' named entity 'expand' named entity 'BRAZIL' named entity 'CAPYBARA' named entity 'MICROBIOTA' named entity 'ENCODING' named entity 'ADAPTED' named entity 'SMACOVIRIDAE' named entity 'COMPLETE' named entity 'FAMILIES' named entity 'DIVERSITY' named entity 'RURAL' named entity 'SINGLE-STRANDED DNA' named entity 'URBAN AREAS' named entity 'SINGLE' named entity 'VIRAL' named entity 'UNCLASSIFIED' named entity 'ADDITION' named entity 'KNOWN' named entity 'NEAR WATER' named entity 'CAPYBARA' named entity 'KNOWLEDGE' named entity 'MAY BE' named entity 'VIRUSES' named entity 'BRAZIL' named entity 'STUDY' named entity 'CIRCULATING' named entity 'USING' named entity 'METAGENOMICS' named entity 'CIRCOVIRIDAE' named entity 'CYCLOVIRUS' named entity 'LARGEST' named entity 'ANIMALS' named entity 'THESE' named entity '148' named entity 'LIMITED' named entity 'PROTEIN ' named entity 'GENOMOVIRIDAE' named entity 'IDENTIFIED' named entity 'EXPAND' named entity 'RODENTS' named entity 'ASSIGNED' named entity 'CIRCULAR' named entity 'DNA VIRUSES' named entity 'SNAPSHOT' named entity 'REPLICATION' named entity 'THEIR' named entity 'FAECES' named entity 'DNA VIRUSES' named entity 'SAMPLED' named entity 'ASSOCIATED WITH' named entity 'SINGLE STRANDED DNA' named entity 'WILD' named entity 'GENOMES' named entity '27S' named entity 'ASSOCIATED' named entity 'DISTRIBUTED' named entity 'SOUTH AMERICA' named entity 'APPROACH' named entity 'HYDROCHAERIS' named entity 'SAMPLING' named entity 'PROVIDES' named entity 'INFORMATION' named entity 'FAECES' named entity 'BODIES' named entity 'FAMILY' named entity 'NOVEL' named entity 'DIET' named entity 'DISTRITO FEDERAL' named entity 'MICROVIRIDAE' named entity 'FOUND' named entity 'INFECTIOUS' named entity 'REFERRED TO' named entity 'TOTAL'

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