About: Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica

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About: Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
Creator	Kim, Hak Song, Jin-Won Gu, Hun Kang, Sung-Ho Kang, Yoon Kim, Jeong-Hoon Lee, Min-Goo Lee, Sook Park, Yon
source	Elsevier; Medline; PMC
abstract	Adenoviruses have been identified in humans and a wide range of vertebrate animals, but not previously from the polar region. Here, we report the entire 26,340-bp genome of a novel adenovirus, detected by PCR, in tissues of six of nine South Polar skuas (Catharacta maccormicki), collected in Lake King Sejong, King George Island, Antarctica, from 2007 to 2009. The DNA polymerase, penton base, hexon and fiber genes of the South Polar skua adenovirus (SPSAdV) exhibited 68.3%, 75.4%, 74.9% and 48.0% nucleotide sequence similarity with their counterparts in turkey hemorrhagic enteritis virus. Phylogenetic analysis based on the entire genome revealed that SPSAdV belonged to the genus Siadenovirus, family Adenoviridae. This is the first evidence of a novel adenovirus, SPSAdV, from a large polar seabird (family Stercorariidae) in Antarctica.
has issue date	2012-01-05(xsd:dateTime)
bibo:doi	10.1016/j.virol.2011.10.008
bibo:pmid	22078165
has license	no-cc
sha1sum (hex)	b3c5851cacc0784a7ee6be6e9270faa092c3c243
schema:url	https://doi.org/10.1016/j.virol.2011.10.008
resource representing a document's title	Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica
has PubMed Central identifier	PMC7111983
has PubMed identifier	22078165
schema:publication	Virology
resource representing a document's body	covid:b3c5851cacc0784a7ee6be6e9270faa092c3c243#body_text
is schema:about of	named entity 'based' named entity 'family' named entity 'Antarctica' named entity 'hemorrhagic' covid:arg/b3c5851cacc0784a7ee6be6e9270faa092c3c243 named entity 'Adenoviruses' named entity 'fiber' named entity 'detected' named entity 'Lake King' named entity 'vertebrate' named entity 'vertebrate animals' named entity 'DNA polymerase' named entity 'nucleotide sequence' named entity 'Antarctica' named entity 'Phylogenetic analysis' named entity 'Stercorariidae' named entity 'South Polar skua' named entity 'budgerigar' named entity 'polymerase' named entity 'virus' named entity 'kidney' named entity 'South Polar skua' named entity 'hexon' named entity 'sialidase' named entity 'infection' named entity 'Oligonucleotide primers' named entity 'clinical signs' named entity 'Siadenovirus' named entity 'respiratory disease' named entity 'Mastadenovirus' named entity 'phylogenetic' named entity 'exon' named entity 'protease' named entity 'London' named entity 'amino acid sequences' named entity 'hemorrhagic' named entity 'agamid adenovirus' named entity 'great tit' named entity 'Mastadenovirus' named entity 'frog' named entity 'South Polar skua' named entity 'gene' named entity 'hexon' named entity 'hexon' named entity 'evolutionary history' named entity 'primer' named entity 'cloning' named entity 'Aviadenovirus' named entity 'Applied Biosystems' named entity 'terminal repeat' named entity 'PCR' named entity 'viremia' named entity 'pVI' named entity 'hexon' named entity 'hexon' named entity 'genome' named entity 'porcine' named entity 'murine' named entity 'denaturation' named entity 'primer' named entity 'genome' named entity 'bat' named entity 'gene' named entity 'Applied Biosystems' named entity 'hexon' named entity 'Mase' named entity 'frog' named entity 'influenza' named entity 'Sulawesi' named entity 'Autopsy' named entity 'amino acid' named entity 'hexon' named entity 'nucleotide'

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