About: Identifying genetic markers of adaptation for surveillance of viral host jumps

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An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Identifying genetic markers of adaptation for surveillance of viral host jumps
Creator	Lloyd-Smith, James Pulliam, Juliet Lass, Sandra Pepin, Kim Read, Andrew
Source	Medline; PMC
abstract	Adaptation is often thought to affect the likelihood that a virus will be able to successfully emerge in a new host species. If so, surveillance for genetic markers of adaptation could help to predict the risk of disease emergence. However, adaptation is difficult to distinguish conclusively from the other processes that generate genetic change. In this Review we survey the research on the host jumps of influenza A, severe acute respiratory syndrome-coronavirus, canine parvovirus and Venezuelan equine encephalitis virus to illustrate the insights that can arise from combining genetic surveillance with microbiological experimentation in the context of epidemiological data. We argue that using a multidisciplinary approach for surveillance will provide a better understanding of when adaptations are required for host jumps and thus when predictive genetic markers may be present. SUPPLEMENTARY INFORMATION: The online version of this article (doi:10.1038/nrmicro2440) contains supplementary material, which is available to authorized users.
has issue date	2010-10-12(xsd:dateTime)
bibo:doi	10.1038/nrmicro2440
bibo:pmid	20938453
has license	no-cc
sha1sum (hex)	a6428da5872ceb698487e61c5b2ad01c51a91790
schema:url	https://doi.org/10.1038/nrmicro2440
resource representing a document's title	Identifying genetic markers of adaptation for surveillance of viral host jumps
has PubMed Central identifier	PMC7097030
has PubMed identifier	20938453
schema:publication	Nat Rev Microbiol
resource representing a document's body	covid:a6428da5872ceb698487e61c5b2ad01c51a91790#body_text
is schema:about of	named entity 'ADAPTATION' named entity 'Venezuelan equine encephalitis virus' named entity 'species' named entity 'experimentation' named entity 'insights' named entity 'epidemiological' named entity 'host' named entity 'viral' named entity 'MICROBIOLOGICAL' named entity 'ABLE TO' named entity 'GENETIC MARKERS' named entity 'REVIEW' named entity 'PRESENT' named entity 'HOST' named entity 'GENETIC MARKERS' named entity 'CORONAVIRUS' named entity 'GENERATE' named entity 'DISEASE' named entity 'THOUGHT' named entity 'EPIDEMIOLOGICAL' named entity 'HOST SPECIES' named entity 'INSIGHTS' named entity 'ADAPTATION' named entity 'GENETIC' named entity 'UNDERSTANDING' named entity 'ADAPTATIONS' named entity 'SEVERE ACUTE RESPIRATORY SYNDROME' named entity 'IDENTIFYING' named entity 'CANINE PARVOVIRUS' named entity 'USING' named entity 'LIKELIHOOD' named entity 'HOST' named entity 'CONTEXT' named entity 'RESEARCH' named entity 'EMERGE' named entity 'BETTER' named entity 'JUMPS' named entity 'SURVEY' named entity 'APPROACH' named entity 'COMBINING' named entity 'MAY BE' named entity 'VIRUS' named entity 'PROCESSES' named entity 'JUMPS' named entity 'MULTIDISCIPLINARY' named entity 'NEW' named entity 'REQUIRED' named entity 'SURVEILLANCE' named entity 'VENEZUELAN EQUINE ENCEPHALITIS VIRUS' named entity 'HELP' named entity 'EMERGENCE' named entity 'DATA' named entity 'GENETIC CHANGE' named entity 'AFFECT' named entity 'DIFFICULT' named entity 'SURVEILLANCE' named entity 'VIRAL' named entity 'INFLUENZA A' named entity 'PROVIDE' named entity 'PREDICTIVE' named entity 'EXPERIMENTATION' named entity 'RISK OF' named entity 'PREDICT' named entity 'However' named entity 'host' named entity 'survey' named entity 'affect' named entity 'emergence' named entity 'disease' named entity 'generate' named entity 'influenza' named entity 'genetic change' named entity 'parvovirus' named entity 'genetic markers' named entity 'epidemiological data' named entity 'promoter sequences' named entity 'epidemic'

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