About: A single bat species in Cameroon harbors multiple highly divergent papillomaviruses in stool identified by metagenomics analysis

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About: A single bat species in Cameroon harbors multiple highly divergent papillomaviruses in stool identified by metagenomics analysis Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	A single bat species in Cameroon harbors multiple highly divergent papillomaviruses in stool identified by metagenomics analysis
Creator	Matthijnssens, Jelle Conceição-Neto, Nádia Van Ranst, Marc Maes, Piet Heylen, Elisabeth Zeller, Mark Rector, Annabel Kwe Yinda, Claude Mbigha Ghogomu, Stephen
topic	covid:a4f4f45914ad5f3481a41f25238d10fe93ff66cd#this
Source	Elsevier; Medline; PMC
abstract	A number of PVs have been described in bats but to the best of our knowledge not from feces. Using a previously described NetoVIR protocol, Eidolon helvum pooled fecal samples (Eh) were treated and sequenced by Illumina next generation sequencing technology. Two complete genomes of novel PVs (EhPV2 and EhPV3) and 3 partial sequences (BATPV61, BATPV890a and BATPV890b) were obtained and analysis showed that the EhPV2 and EhPV3 major capsid proteins cluster with and share 60–64% nucleotide identity with that of Rousettus aegyptiacus PV1, thus representing new species of PVs within the genus Psipapillomavirus. The other PVs clustered in different branches of our phylogenetic tree and may potentially represent novel species and/or genera. This points to the vast diversity of PVs in bats and in Eidolon helvum bats in particular, therefore adding support to the current concept that PV evolution is more complex than merely strict PV-host co-evolution.
has issue date	2016-08-20(xsd:dateTime)
bibo:doi	10.1016/j.virep.2016.08.001
bibo:pmid	32289018
has license	no-cc
sha1sum (hex)	a4f4f45914ad5f3481a41f25238d10fe93ff66cd
schema:url	https://doi.org/10.1016/j.virep.2016.08.001
resource representing a document's title	A single bat species in Cameroon harbors multiple highly divergent papillomaviruses in stool identified by metagenomics analysis
has PubMed Central identifier	PMC7103942
has PubMed identifier	32289018
schema:publication	Virol Rep
resource representing a document's body	covid:a4f4f45914ad5f3481a41f25238d10fe93ff66cd#body_text
is http://vocab.deri.ie/void#inDataset of	proxy:http/ns.inria.fr/covid19/a4f4f45914ad5f3481a41f25238d10fe93ff66cd
is schema:about of	named entity 'points' named entity 'samples' named entity 'nucleotide' named entity 'stool' named entity 'highly' named entity 'BAT' named entity 'LICENSE' named entity 'POOLED' named entity 'HAVE' named entity 'EVOLUTION' named entity 'COMPLETE' named entity 'OUR' named entity 'CURRENT' named entity 'SPECIES' named entity 'ANALYSIS' named entity 'GENOMES' named entity 'COMPLEX' named entity 'DIVERSITY' named entity 'PSIPAPILLOMAVIRUS' named entity 'ADDING' named entity 'PHYLOGENETIC TREE' named entity 'NUCLEOTIDE' named entity 'USING' named entity 'CLUSTERED' named entity 'OBTAINED' named entity 'BATS' named entity 'SUPPORT' named entity 'PREVIOUSLY' named entity 'GENUS' named entity '60-64' covid:arg/a4f4f45914ad5f3481a41f25238d10fe93ff66cd named entity 'METAGENOMICS ANALYSIS' named entity 'DIFFERENT' named entity 'FECES' named entity 'KNOWLEDGE' named entity 'EIDOLON HELVUM' named entity 'PROTOCOL' named entity 'BEST' named entity 'TREATED' named entity 'ILLUMINA' named entity 'FECAL' named entity 'PV1' named entity 'SHARE' named entity 'POINTS' named entity 'NEXT GENERATION SEQUENCING TECHNOLOGY' named entity 'HIGHLY' named entity 'NC-' named entity 'STOOL' named entity 'MAJOR' named entity 'CONCEPT' named entity 'BUT' named entity 'MULTIPLE' named entity 'CAMEROON' named entity 'PAPILLOMAVIRUSES' named entity 'SINGLE' named entity 'SPECIES' named entity 'SEQUENCES' named entity 'PVS' named entity 'NUMBER OF' named entity 'HOST' named entity 'DESCRIBED' named entity 'NEW SPECIES' named entity 'PARTICULAR' named entity 'ROUSETTUS AEGYPTIACUS' named entity 'ORG' named entity 'IDENTIFIED BY' named entity 'BRANCHES' named entity 'NOVEL' named entity 'IDENTITY' named entity 'CAPSID PROTEINS' named entity 'SAMPLES'

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