About: Genome Sequences of Human Coronavirus OC43 and NL63, Associated with Respiratory Infections in Kilifi, Kenya

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About: Genome Sequences of Human Coronavirus OC43 and NL63, Associated with Respiratory Infections in Kilifi, Kenya Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Genome Sequences of Human Coronavirus OC43 and NL63, Associated with Respiratory Infections in Kilifi, Kenya
Creator	Kamau, Everlyn Agoti, Charles Adema, Irene De Laurent, Zaydah Luka, Martha Nokes, D
Source	Medline; PMC
abstract	Coding-complete genomes of two human coronavirus OC43 strains and one NL63 strain were obtained by metagenomic sequencing of clinical samples collected in 2017 and 2018 in Kilifi, Kenya. Maximum likelihood phylogenies showed that the OC43 strains were genetically dissimilar and that the NL63 strain was closely related to NL63 genotype B viruses.
has issue date	2019-11-14(xsd:dateTime)
bibo:doi	10.1128/mra.00730-19
bibo:pmid	31727697
has license	cc-by
sha1sum (hex)	9ade0372676abdf2b9bcc87c5d924bc945be0a92
schema:url	https://doi.org/10.1128/mra.00730-19
resource representing a document's title	Genome Sequences of Human Coronavirus OC43 and NL63, Associated with Respiratory Infections in Kilifi, Kenya
has PubMed Central identifier	PMC6856263
has PubMed identifier	31727697
schema:publication	Microbiol Resour Announc
resource representing a document's body	covid:9ade0372676abdf2b9bcc87c5d924bc945be0a92#body_text
is schema:about of	named entity 'NL63' named entity 'OC43' named entity 'KENYA' named entity 'GENOTYPE' named entity '2018' named entity 'SAMPLES' named entity 'HUMAN CORONAVIRUS OC43' named entity 'COLLECTED' named entity 'METAGENOMIC SEQUENCING' named entity 'CODING' named entity 'ASSOCIATED WITH' named entity 'KILIFI' named entity 'GENOMES' named entity 'STRAINS' named entity 'COMPLETE' named entity 'VIRUSES' covid:arg/9ade0372676abdf2b9bcc87c5d924bc945be0a92 named entity 'KILIFI' named entity 'SEQUENCES' named entity 'OC43' named entity 'MAXIMUM LIKELIHOOD' named entity 'RELATED' named entity 'DISSIMILAR' named entity 'CLINICAL' named entity 'STRAIN' named entity 'HUMAN CORONAVIRUS OC43' named entity 'GENOME' named entity 'RESPIRATORY INFECTIONS' named entity 'OBTAINED BY' named entity 'KENYA' named entity 'NL63' named entity 'OC43' named entity 'strains' named entity 'phylogenies' named entity 'genetically' named entity 'strain' named entity 'phylogenies' named entity 'Respiratory Infections' named entity 'Coronavirus OC43' named entity 'NL63' named entity 'Kilifi' named entity 'samples' named entity 'genomes' named entity 'Kilifi' named entity 'structural proteins' named entity 'codons' named entity 'Maximum likelihood' named entity 'genomes' named entity 'genomes' named entity 'BLASTn' named entity 'influenza' named entity 'NL63' named entity 'genomes' named entity 'coronaviruses' named entity 'primers' named entity 'OC43' named entity 'Invitrogen' named entity 'kmer' named entity 'OC43' named entity 'acute respiratory infection' named entity 'nucleotide' named entity 'OC43' named entity 'SPAdes' named entity 'OC43' named entity 'NL63' named entity 'sequence alignment' named entity 'rRT-PCR' named entity 'Coronaviridae' named entity 'informed consent' named entity 'Illumina' named entity 'enveloped viruses' named entity 'nasopharyngeal swabs' named entity 'NL63' named entity 'Sequence Read Archive' named entity 'cough' named entity 'NL63'

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