About: Phylogenic analysis of human bocavirus detected in children with acute respiratory infection in Yaounde, Cameroon

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About: Phylogenic analysis of human bocavirus detected in children with acute respiratory infection in Yaounde, Cameroon Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

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type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Phylogenic analysis of human bocavirus detected in children with acute respiratory infection in Yaounde, Cameroon
Creator	Vabret, Astrid Kenmoe, Sebastien Njouom, Richard Njankouo-Ripa, Mohamadou Vernet, Marie-Astrid Beng Penlap, Véronique
Source	Medline; PMC
abstract	OBJECTIVE: Human Bocavirus (HBoV) was first identified in 2005 and has been shown to be a common cause of respiratory infections and gastroenteritis in children. In a recent study, we found that 10.7% of children with acute respiratory infections (ARI) were infected by HBoV. Genetic characterization of this virus remains unknown in Central Africa, particularly in Cameroon Leeding us to evaluate the molecular characteristics of HBoV strains in Cameroonian children with ARI. RESULTS: Phylogenetic analysis of partial HBoV VP1/2 sequences showed a low level of nucleotide variation and the circulation of HBoV genotype 1 (HBoV-1) only. Three clades were obtained, two clustering with each of the reference strains ST1 and ST2, and a third group consisting of only Cameroon strains. By comparing with the Swedish reference sequences, ST1 and ST2, Cameroon sequences showed nucleotide and amino acid similarities of respectively 97.36–100% and 98.35–100%. These results could help improve strategies for monitoring and control of respiratory infections in Cameroon.
has issue date	2017-07-17(xsd:dateTime)
bibo:doi	10.1186/s13104-017-2620-y
bibo:pmid	28716110
has license	cc-by
sha1sum (hex)	971794b30f2ec41a9c9708c25873f3cf55129518
schema:url	https://doi.org/10.1186/s13104-017-2620-y
resource representing a document's title	Phylogenic analysis of human bocavirus detected in children with acute respiratory infection in Yaounde, Cameroon
has PubMed Central identifier	PMC5514512
has PubMed identifier	28716110
schema:publication	BMC Res Notes
resource representing a document's body	covid:971794b30f2ec41a9c9708c25873f3cf55129518#body_text
is schema:about of	named entity 'respiratory infections' named entity 'Human' named entity 'infected' named entity 'acute respiratory infection' named entity 'CHILDREN' named entity 'EVALUATE' named entity 'MOLECULAR' named entity 'CAUSE' named entity 'IDENTIFIED' named entity 'CHARACTERISTICS' named entity 'ACUTE RESPIRATORY INFECTIONS' named entity 'UNKNOWN' named entity 'CAMEROON' named entity '10.7' named entity 'ARI' named entity 'FOUND' named entity 'VIRUS' named entity 'HUMAN BOCAVIRUS' named entity 'GENETIC CHARACTERIZATION' named entity 'CAMEROONIAN' named entity 'STUDY' named entity 'OBJECTIVE' named entity 'A COMMON' named entity 'HUMAN BOCAVIRUS DETECTED' named entity 'ACUTE RESPIRATORY INFECTION' named entity 'ANALYSIS' named entity 'CAMEROON' named entity 'GASTROENTERITIS' named entity 'CENTRAL AFRICA' named entity 'RECENT' named entity 'STRAINS' named entity 'CHILDREN' named entity 'YAOUNDE' named entity 'INFECTED' named entity 'RESPIRATORY INFECTIONS' named entity 'Cameroon' named entity 'Objective' named entity 'strains' named entity 'HBoV' named entity 'Cameroon' named entity 'Human Bocavirus' named entity 'Australia' named entity 'neighbor-joining' named entity 'Parvoviridae' named entity 'Big Dye Terminator' named entity 'HBoV' named entity 'capsid' named entity '5.2' named entity 'gene' named entity 'capsid' named entity 'virus' named entity 'transversions' named entity 'clades' named entity 'Lyon' named entity 'Bocavirus' named entity 'nucleotide sequences' named entity 'highly conserved' named entity 'phylogenetic analysis' named entity 'viruses' named entity 'HBoV' named entity 'base pair' named entity 'primers' named entity 'Middle East' named entity 'HBoV' named entity 'genus' named entity 'PCR' named entity 'gastroenteritis' named entity 'clade' named entity 'clade' named entity 'Cameroon' named entity 'gene sequences' named entity 'Pasteur' named entity 'virus' named entity 'genotype' named entity 'consensus sequence' named entity 'BMC Research Notes'

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