About: Molecular epidemiology of Korean porcine sapeloviruses

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About: Molecular epidemiology of Korean porcine sapeloviruses Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Molecular epidemiology of Korean porcine sapeloviruses
Creator	Cho, Kyoung-Oh Kang, Mun-Il Kwon, Hyoung-Jun Matthijnssens, Jelle Park, Jun-Gyu Ryu, Eun-Hye Son, Kyu-Yeol Hosmillo, Myra Kim, Ji-Yun Alfajaro, Madel Kim, • Deok-Song Mia, •
Source	Medline; PMC
abstract	To evaluate the prevalence and genetic diversity of porcine sapeloviruses (PSVs) in Korea, a total of 100 diarrhea fecal samples from pigs were analyzed by RT-PCR and nested PCR assays with primer pairs specific for the VP1 gene. Overall, 34 % of the diarrhea samples tested positive for PSV, and a high proportion of infections occurred along with a variety of other enteric viruses and bacteria. Genomic and phylogenetic analysis of the VP1 genes revealed pronounced genetic diversities between PSVs from Korean and elsewhere. Our results indicate that PSV infections are very common in Korean pigs with diarrhea. The infecting strains are genetically diverse. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s00705-013-1901-6) contains supplementary material, which is available to authorized users.
has issue date	2013-11-15(xsd:dateTime)
bibo:doi	10.1007/s00705-013-1901-6
bibo:pmid	24232913
has license	no-cc
sha1sum (hex)	91fac25e65f3d6be9e5a88837734644048219ec1
schema:url	https://doi.org/10.1007/s00705-013-1901-6
resource representing a document's title	Molecular epidemiology of Korean porcine sapeloviruses
has PubMed Central identifier	PMC7087272
has PubMed identifier	24232913
schema:publication	Arch Virol
resource representing a document's body	covid:91fac25e65f3d6be9e5a88837734644048219ec1#body_text
is schema:about of	named entity 'porcine' named entity 'KOREA' named entity 'PSVS' named entity 'TOTAL' named entity 'OUR' named entity 'PREVALENCE' named entity 'INFECTING' named entity 'PORCINE' named entity 'GENE' named entity 'VARIETY' named entity 'EVALUATE' named entity 'DIARRHEA' named entity 'OCCURRED' named entity 'ANALYZED' named entity 'PIGS' named entity 'KOREAN' named entity 'PORCINE' named entity 'VP1' named entity 'INFECTIONS' named entity 'ENTERIC' named entity 'DIVERSE' named entity 'GENETIC' named entity 'PRIMER' named entity '100' named entity 'MOLECULAR EPIDEMIOLOGY' named entity 'BACTERIA.' named entity 'NESTED PCR ' named entity 'KOREAN' named entity 'PSV' named entity 'PHYLOGENETIC ANALYSIS' named entity 'SPECIFIC' named entity 'POSITIVE FOR' named entity 'PAIRS' named entity 'TESTED' named entity 'VIRUSES' named entity 'SAMPLES' named entity 'HIGH' named entity 'FECAL' named entity 'GENOMIC' named entity 'RT-PCR' named entity 'RESULTS' named entity 'OVERALL' named entity 'STRAINS' named entity 'GENES' named entity 'GENETIC DIVERSITY' named entity 'COMMON' named entity 'REVEALED' named entity 'PROPORTION' covid:arg/91fac25e65f3d6be9e5a88837734644048219ec1 named entity 'high' named entity 'gene' named entity 'assays' named entity 'strains' named entity 'porcine' named entity 'RT-PCR' named entity 'primer pairs' named entity 'enteric viruses' named entity 'phylogenetic analysis' named entity 'nested PCR' named entity 'Porcine' named entity 'Escherichia coli' named entity 'amino acid' named entity 'RT-PCR' named entity 'nucleotide' named entity 'centrifuged' named entity 'gastroenteritis' named entity 'sensitivity and specificity' named entity 'viral RNA' named entity 'VP1' named entity 'pH 7'

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