About: Sequence of mouse hepatitis virus A59 mRNA 2: Indications for RNA recombination between coronaviruses and influenza C virus

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Sequence of mouse hepatitis virus A59 mRNA 2: Indications for RNA recombination between coronaviruses and influenza C virus Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Sequence of mouse hepatitis virus A59 mRNA 2: Indications for RNA recombination between coronaviruses and influenza C virus
Creator	Luytjes, Willem Bredenbeek, Peter Horzinek, Marian Noten, Ans Spaan', Andwillyj
Source	Elsevier; Medline; PMC
abstract	Abstract The nucleotide sequence of the unique region of coronavirus MHV-A59 mRNA 2 has been determined. Two open reading frames (ORF) are predicted: ORF1 potentially encodes a protein of 261 amino acids; its amino acid sequence contains elements which indicate nucleotide binding properties. ORF2 predicts a 413 amino acids protein; it lacks a translation initiation codon and is therefore probably a pseudogene. The amino acid sequence of ORF2 shares 30% homology with the HA1 hemagglutinin sequence of influenza C virus. A short stretch of nucleotides immediately upstream of ORF2 shares 83% homology with the MHC class I nucleotide sequences. We discuss the possibilitythat both similarities are the result of recombinations and present a model for the acquisition and the subsequent inactivation of ORF2; the model applies also to MHV-A59-related coronaviruses in which we expect ORF2 to be still functional.
has issue date	1988-10-31(xsd:dateTime)
bibo:doi	10.1016/0042-6822(88)90512-0
bibo:pmid	2845655
has license	els-covid
sha1sum (hex)	8151ddc2f3b7ce323d15f39b1d7030b1d7ef84fb
schema:url	https://doi.org/10.1016/0042-6822%2888%2990512-0
resource representing a document's title	Sequence of mouse hepatitis virus A59 mRNA 2: Indications for RNA recombination between coronaviruses and influenza C virus
has PubMed Central identifier	PMC7118983
has PubMed identifier	2845655
schema:publication	Virology
resource representing a document's body	covid:8151ddc2f3b7ce323d15f39b1d7030b1d7ef84fb#body_text
is schema:about of	named entity 'RNA RECOMBINATION' named entity 'RESULT' named entity 'PREDICTED' named entity 'SHARES' named entity 'IMMEDIATELY' named entity 'STRETCH' named entity 'PSEUDOGENE' named entity 'ORF2' named entity 'OPEN READING FRAMES' named entity 'amino acid' named entity 'mRNA' named entity 'ORF2' named entity 'nucleotide' named entity 'shares' named entity 'mRNA' named entity 'A59' named entity 'DETERMINED' named entity 'PRESENT' named entity 'SEQUENCE' named entity 'CORONAVIRUSES' named entity 'MOUSE HEPATITIS VIRUS' named entity 'FUNCTIONAL' named entity 'AMINO ACID SEQUENCE' named entity 'MHV' named entity 'INFLUENZA C VIRUS' named entity 'UNIQUE' named entity 'DISCUSS' named entity 'PROTEIN' named entity 'RECOMBINATIONS' named entity 'INACTIVATION' named entity 'PROTEIN ' named entity 'SHORT' named entity 'TRANSLATION INITIATION' named entity 'AMINO ACIDS' named entity 'PROPERTIES' named entity 'A59' named entity 'RELATED' named entity 'INDICATIONS' named entity 'A59' named entity 'INFLUENZA C VIRUS' named entity 'HA1' named entity 'CORONAVIRUSES' named entity 'NUCLEOTIDES' named entity 'ACQUISITION' named entity 'HEMAGGLUTININ' named entity 'A PROTEIN' named entity 'UPSTREAM' named entity 'CONTAINS' named entity 'MRNA' named entity 'NUCLEOTIDE SEQUENCE' named entity 'MHC CLASS I' named entity 'REGION' named entity 'HOMOLOGY' named entity '300' named entity 'CORONAVIRUS' named entity 'SUBSEQUENT' named entity 'LACKS' named entity 'ELEMENTS' named entity 'PROBABLY' named entity 'MRNA' named entity 'ITS' named entity 'NUCLEOTIDE BINDING' named entity 'INITIATION CODON' named entity 'MODEL' named entity 'SEQUENCE' named entity 'encodes' named entity 'amino acids' named entity 'predicted' named entity 'hemagglutinin' named entity 'shares' named entity 'coronaviruses' named entity 'binding properties' named entity 'ORF2' named entity 'homology' named entity 'nucleotide sequence' named entity 'MHV' named entity 'nucleotides'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software