About: Discovery of Novel Alphacoronaviruses in European Rodents and Shrews

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An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Discovery of Novel Alphacoronaviruses in European Rodents and Shrews
Creator	Ball, Jonathan Chapman, Sarah Danjittrong, Taechasit Dayman, Emma Dobbs, Phillipa Horncastle, Emma Onianwa, Okechukwu Strong, Victoria Tsoleridis, Theocharis Wachtl, Marta Zhu, Miaoran Behnke, Jerzy Patrick Mcclure, C Tarlinton, Rachael
Source	Medline; PMC
abstract	Eight hundred and thirteen European rodents and shrews encompassing seven different species were screened for alphacoronaviruses using PCR detection. Novel alphacoronaviruses were detected in the species Rattus norvegicus, Microtus agrestis, Sorex araneus and Myodes glareolus. These, together with the recently described Lucheng virus found in China, form a distinct rodent/shrew-specific clade within the coronavirus phylogeny. Across a highly conserved region of the viral polymerase gene, the new members of this clade were up to 22% dissimilar at the nucleotide level to the previously described Lucheng virus. As such they might represent distinct species of alphacoronaviruses. These data greatly extend our knowledge of wildlife reservoirs of alphacoronaviruses.
has issue date	2016-03-18(xsd:dateTime)
bibo:doi	10.3390/v8030084
bibo:pmid	27102167
has license	cc-by
sha1sum (hex)	6da13d90743ba52bded6ed06e214541ba19d5078
schema:url	https://doi.org/10.3390/v8030084
resource representing a document's title	Discovery of Novel Alphacoronaviruses in European Rodents and Shrews
has PubMed Central identifier	PMC4810274
has PubMed identifier	27102167
schema:publication	Viruses
resource representing a document's body	covid:6da13d90743ba52bded6ed06e214541ba19d5078#body_text
is schema:about of	named entity 'WILDLIFE' named entity 'FOUND' named entity 'DATA' named entity 'RESERVOIRS' named entity 'THIRTEEN' named entity 'RODENTS' named entity 'SEVEN' named entity 'DIFFERENT' named entity 'SHREWS' named entity 'EUROPEAN' named entity 'FORM' named entity 'DESCRIBED' named entity 'CONSERVED REGION' named entity 'EUROPEAN' named entity 'PHYLOGENY' named entity 'DETECTED' named entity 'DISCOVERY' named entity 'RODENTS' named entity 'RATTUS NORVEGICUS' named entity 'KNOWLEDGE' named entity 'PREVIOUSLY' named entity 'SOREX ARANEUS' named entity 'NOVEL' named entity 'NOVEL' named entity 'UP TO' named entity 'DISSIMILAR' named entity 'RODENT' named entity 'VIRAL POLYMERASE' named entity 'VIRUS' named entity 'NUCLEOTIDE' named entity 'OUR' named entity 'SHREWS' named entity 'MEMBERS' named entity 'THESE' named entity 'RECENTLY' named entity 'MYODES GLAREOLUS' named entity 'NEW' named entity 'CLADE' named entity 'SPECIES' named entity 'SPECIFIC' named entity 'MICROTUS AGRESTIS' named entity 'DISTINCT' named entity 'GREATLY' named entity 'CORONAVIRUS' named entity 'POLYMERASE GENE' named entity 'DETECTION' named entity 'CHINA' named entity 'USING' named entity 'EXTEND' named entity 'ACROSS' named entity 'LEVEL' named entity 'HIGHLY' named entity 'REPRESENT' named entity 'PCR' named entity 'genome' named entity 'predator' named entity 'Microtus' named entity 'highly conserved' named entity 'alphacoronaviruses' named entity 'alphacoronaviruses' named entity 'Rodents' named entity 'epizootic' named entity 'Coronavirus' named entity 'conserved regions' named entity 'liver' named entity 'respiratory tract' named entity 'Nottingham' named entity 'Myodes'

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