About: Probable reassortment of genomic elements among elongated RNA-containing plant viruses

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About: Probable reassortment of genomic elements among elongated RNA-containing plant viruses Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Probable reassortment of genomic elements among elongated RNA-containing plant viruses
Creator	Dolja, Valerian Atabekov, Joseph Morozov, Sergei
Source	PMC
abstract	The relationships of genome organization among elongated (rod-shaped and filamentous) plant viruses have been analyzed. Sequences in coding and noncoding regions of barley stripe mosaic virus (BSMV) RNAs 1, 2, and 3 were compared with those of the monopartite RNA genomes of potato virus X (PVX), white clover mosaic virus (WClMV), and tobacco mosaic virus, the bipartite genome of tobacco rattle virus (TRV), the quadripartite genome of beet necrotic yellow vein virus (BNYVV), and icosahedral tricornaviruses. These plant viruses belong to a supergroup having 5′-capped genomic RNAs. The results suggest that the genomic elements in each BSMV RNA are phylogenetically related to those of different plant RNA viruses. RNA 1 resembles the corresponding RNA 1 of tricornaviruses. The putative proteins encoded in BSMV RNA 2 are related to the products of BNYVV RNA 2, PVX RNA, and WClMV RNA. Amino acid sequence comparisons suggest that BSMV RNA 3 resembles TRV RNA 1. Also, it can be proposed that in the case of monopartite genomes, as a rule, every gene or block of genes retains phylogenetic relationships that are independent of adjacent genomic elements of the same RNA. Such differential evolution of individual elements of one and the same viral genome implies a prominent role for gene reassortment in the formation of viral genetic systems.
has issue date	1989-01-01(xsd:dateTime)
bibo:doi	10.1007/bf02106181
bibo:pmid	2504930
has license	no-cc
sha1sum (hex)	45dec77aec5463c15defaf9c4f3edbe6e2f62119
schema:url	https://doi.org/10.1007/bf02106181
resource representing a document's title	Probable reassortment of genomic elements among elongated RNA-containing plant viruses
has PubMed Central identifier	PMC7087513
has PubMed identifier	2504930
schema:publication	J Mol Evol
resource representing a document's body	covid:45dec77aec5463c15defaf9c4f3edbe6e2f62119#body_text
is schema:about of	named entity 'supergroup' named entity 'formation' named entity 'genome' named entity 'implies' named entity 'noncoding' named entity 'genomes' named entity 'products' named entity 'Evolution' named entity 'PLANT VIRUSES' named entity 'ADJACENT' named entity 'RNA VIRUSES' named entity 'THESE' named entity 'TOBACCO RATTLE VIRUS' named entity 'RELATED' named entity 'QUADRIPARTITE' named entity 'GENE' named entity 'ENCODED' named entity 'FORMATION' named entity 'ANALYZED' named entity 'RELATIONSHIPS' named entity 'TOBACCO MOSAIC VIRUS' named entity 'INDEPENDENT OF' named entity 'PRODUCTS' named entity 'plant viruses' named entity 'RNA' named entity 'compared' named entity 'RNAs' named entity 'RNA' named entity 'genomic' named entity 'reassortment' named entity 'phylogenetic' named entity 'genome' named entity 'Genomic' named entity 'Journal' named entity 'BSMV' named entity 'barley stripe mosaic virus' named entity 'gene' named entity 'tobacco rattle virus' named entity 'virus' named entity 'barley stripe mosaic virus' named entity 'white clover mosaic virus' named entity 'RNA' named entity 'BNYVV' named entity 'genome' named entity 'RNA' named entity 'RNAs' named entity 'noncoding regions' named entity 'Viruses' named entity 'RNA' named entity 'PVX' named entity 'similarity matrix' named entity 'binding protein' named entity 'protein' named entity 'membrane-bound' named entity 'BSMV' named entity 'BSMV' named entity 'RNA polymerases' named entity 'protein' named entity 'BSMV' named entity 'plant viruses' named entity 'PVX' named entity 'plant viruses' named entity 'polyadenylated' named entity 'double-stranded' named entity 'mosaic virus' named entity 'RNA' named entity 'hydrophilic' named entity 'subgenomic RNAs' named entity 'potato virus' named entity 'supergroup' named entity 'tobamovirus' named entity 'ORFs' named entity 'RNA' named entity 'RNA sequence' named entity 'highly conserved' named entity 'RNA' named entity 'amino acid sequence' named entity 'RNA' named entity 'cauliflower mosaic virus'

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