About: Complete Genomic and Ultrastructural Analysis of a Nam Dinh Virus Isolated from Culex pipiens quinquefasciatus in China*

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About: Complete Genomic and Ultrastructural Analysis of a Nam Dinh Virus Isolated from Culex pipiens quinquefasciatus in China* Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Complete Genomic and Ultrastructural Analysis of a Nam Dinh Virus Isolated from Culex pipiens quinquefasciatus in China*
Creator	Chen, Yingjian Gan, Liping Jin, Yujuan Li, Jingmei Liu, Qu Xie, Xianqing Zhang, Qiwen Zhou, Jianming Jin, Zhou, Yujuan
Source	Medline; PMC
abstract	The Nam Dinh virus (NDiV) was isolated from Culex quinquefasciatus in Shenzhen, China, for the first time, in 2011. In this study, we characterized the ultrastructure of NDiV, determined its complete genome sequence and made comparisons with other known nidoviruses. Electron microscopic observation revealed that the NDiV strain isolated in China produced viral nucleocapsid-like particles and vesicles in host cells. The extracellular virions were enveloped and were spherical with short spikes. The complete genome sequence of the newly isolated NDiV was submitted to the GenBank database (GenBank accession number KF522691). Sequencing of the viral genome showed that the homologies of NDiV isolated in China and Vietnam were greater than 94.0% and 89.0% at the nucleotide and amino acid sequence levels, respectively. Moreover, gene substitution was detected, whereas insertions and deletions were not. A phylogenetic tree analysis showed that these viruses belong to the genus Alphamesonivirus1 of the family Mesoniviridae. The similarity between the two viruses regarding morphological and molecular biological characteristics indicates that the molecular genetics of NDiV are conservative and that the regional differences are unlikely to have a significant effect. This is the first report of the isolation and complete sequencing of a mesonivirus in mainland China.
has issue date	2017-03-21(xsd:dateTime)
bibo:doi	10.1038/s41598-017-00340-3
bibo:pmid	28325899
has license	cc-by
sha1sum (hex)	1f29ce1525b32b7b954901bc5c04aaffe615ccd9
schema:url	https://doi.org/10.1038/s41598-017-00340-3
resource representing a document's title	Complete Genomic and Ultrastructural Analysis of a Nam Dinh Virus Isolated from Culex pipiens quinquefasciatus in China*
has PubMed Central identifier	PMC5428213
has PubMed identifier	28325899
schema:publication	Sci Rep
resource representing a document's body	covid:1f29ce1525b32b7b954901bc5c04aaffe615ccd9#body_text
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