About: Genome and Bioinformatic Analysis of a HAdV-B14p1 Virus Isolated from a Baby with Pneumonia in Beijing, China

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About: Genome and Bioinformatic Analysis of a HAdV-B14p1 Virus Isolated from a Baby with Pneumonia in Beijing, China Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Genome and Bioinformatic Analysis of a HAdV-B14p1 Virus Isolated from a Baby with Pneumonia in Beijing, China
Creator	Xie, Zhengde An, Junjing Dehghan, Shoaleh Ji, Yixin Seto, Donald Tang, Liuying Xu, Wenbo
source	Medline; PMC
abstract	The genome of HAdV-B14p1 strain BJ430, isolated from a six-month-old baby diagnosed with bronchial pneumonia at the Beijing Children’s Hospital in December 2010, was sequenced, analyzed, and compared with reference adenovirus genome sequences archived in GenBank. This genome is 34,762 bp in length, remarkably presenting 99.9% identity with the genome from HAdV14p1 strain 303600, which was isolated in the USA (2006). Even more remarkable, it is 99.7% identical with the HAdV-B14p (prototype “de Wit” strain) genome, isolated from The Netherlands in 1955. The patient and its parents presumably had no or limited contact with persons from the USA and Ireland, both of which reported outbreaks of the re-emergent virus HAdV-14p1 recently. These genome data, its analysis, and this report provide a reference for any additional HAdV-B14 outbreak in China and provide the basis for the development of adenovirus vaccines and molecular pathogen surveillance protocols in high-risk areas.
has issue date	2013-03-29(xsd:dateTime)
bibo:doi	10.1371/journal.pone.0060345
bibo:pmid	23555956
has license	cc-by
sha1sum (hex)	0ac675fdff45bfddf5aea34d37f58ad7df4f78b9
schema:url	https://doi.org/10.1371/journal.pone.0060345
resource representing a document's title	Genome and Bioinformatic Analysis of a HAdV-B14p1 Virus Isolated from a Baby with Pneumonia in Beijing, China
has PubMed Central identifier	PMC3612040
has PubMed identifier	23555956
schema:publication	PLoS One
resource representing a document's body	covid:0ac675fdff45bfddf5aea34d37f58ad7df4f78b9#body_text
is schema:about of	named entity 'BEIJING' named entity 'BIOINFORMATIC' named entity 'GENOME' named entity 'GENOME' named entity 'ANALYSIS' named entity 'VIRUS' named entity 'CHINA' named entity 'BABY' named entity 'STRAIN' named entity 'ISOLATED' named entity 'PNEUMONIA' named entity 'Pneumonia' named entity 'Virus' named entity 'pathogen' named entity 'B21' named entity 'viral pathogens' named entity 'D.S.' named entity 'synonymous mutation' named entity 'clades' named entity 'respiratory disease' named entity 'consensus sequence' named entity 'hexon' named entity 'genome was sequenced' named entity 'China' named entity 'respiratory tract disease' named entity 'genome sequenced' named entity 'China' named entity 'China' named entity 'Asia' named entity 'virus isolation' named entity 'Molecular Genetic Analysis' named entity 'bioinformatics' named entity 'deletions' named entity '1, 2' named entity 'sequence similarity' named entity 'GenBank' named entity 'respiratory infections' named entity 'phylogeny' named entity 'common ancestry' named entity 'adenovirus' named entity 'adenovirus' named entity 'epidemiologic' named entity 'Ireland' named entity 'virus' named entity 'hexon' named entity 'GenBank' named entity 'virus' named entity 'ARD' named entity 'Phylogenetic analysis' named entity 'Beijing' named entity 'recombination events' named entity 'China' named entity 'respiratory disease' named entity 'public health' named entity 'hexon' named entity 'adenovirus' named entity 'cell lysate' named entity 'gene' named entity 'open reading frames' named entity 'pathogens' named entity 'genome' named entity 'Netherlands' named entity 'genomes' named entity 'genome data' named entity 'genomes' named entity 'genome' named entity 'genomes' named entity 'E2B' named entity 'bronchial pneumonia' named entity 'epidemiologists' named entity 'renal tract' named entity 'nosocomial' named entity 'genome' named entity 'GenBank' named entity 'genomes'

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