About: Phylodynamic applications in 21(st) century global infectious disease research

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An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Phylodynamic applications in 21(st) century global infectious disease research
Creator	Ciccozzi, Massimo Prosperi, Mattia Salemi, Marco Chen, Xinguang Mavian, Carla Min, Jae Rife, Brittany
Source	Medline; PMC
abstract	BACKGROUND: Phylodynamics, the study of the interaction between epidemiological and pathogen evolutionary processes within and among populations, was originally defined in the context of rapidly evolving viruses and used to characterize transmission dynamics. The concept of phylodynamics has evolved since the early 21(st) century, extending its reach to slower-evolving pathogens, including bacteria and fungi, and to the identification of influential factors in disease spread and pathogen population dynamics. RESULTS: The phylodynamic approach has now become a fundamental building block for the development of comparative phylogenetic tools capable of incorporating epidemiological surveillance data with molecular sequences into a single statistical framework. These innovative tools have greatly enhanced scientific investigations of the temporal and geographical origins, evolutionary history, and ecological risk factors associated with the growth and spread of viruses such as human immunodeficiency virus (HIV), Zika, and dengue and bacteria such as Methicillin-resistant Staphylococcus aureus. CONCLUSIONS: Capitalizing on an extensive review of the literature, we discuss the evolution of the field of infectious disease epidemiology and recent accomplishments, highlighting the advancements in phylodynamics, as well as the challenges and limitations currently facing researchers studying emerging pathogen epidemics across the globe. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s41256-017-0034-y) contains supplementary material, which is available to authorized users.
has issue date	2017-05-08(xsd:dateTime)
bibo:doi	10.1186/s41256-017-0034-y
bibo:pmid	29202081
has license	cc-by
sha1sum (hex)	659220e080e623e34f3efe2ce84e63fb2cefdd8e
schema:url	https://doi.org/10.1186/s41256-017-0034-y
resource representing a document's title	Phylodynamic applications in 21(st) century global infectious disease research
has PubMed Central identifier	PMC5683535
has PubMed identifier	29202081
schema:publication	Glob Health Res Policy
resource representing a document's body	covid:659220e080e623e34f3efe2ce84e63fb2cefdd8e#body_text
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