About: Molecular characterisation of the virulent canine coronavirus CB/05 strain

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Molecular characterisation of the virulent canine coronavirus CB/05 strain Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Molecular characterisation of the virulent canine coronavirus CB/05 strain
Creator	Buonavoglia, Canio Campolo, Marco Decaro, Nicola Desario, Costantina Elia, Gabriella Martella, Vito Cirone, Francesco Tempesta, Maria
Source	Elsevier; Medline; PMC
abstract	Abstract This paper characterises a virulent strain (CB/05) of canine coronavirus (CCoV) isolated from the internal organs of pups that had died of a systemic disease without evidence of other common canine pathogens. High viral RNA titres were detected in the internal organs by a real-time RT-PCR assay specific for CCoV type II. Sequence analysis of the 3′ end (8.7kb) of the genomic RNA of strain CB/05 revealed conserved structural as well as non-structural proteins, with the exception of a truncated form of non-structural protein 3b. The exceptional form was due to a 38-nucleotide deletion and a frame shift in ORF3b that introduced an early stop codon. By phylogenetic analysis of the structural proteins, the spike (S) protein was found to cluster with feline coronavirus type II strain 79-1683, whereas, the envelope (E), membrane (M) and nucleocapsid (N) proteins segregated together with the reference strain Purdue of transmissible gastroenteritis virus of swine.
has issue date	2007-04-30(xsd:dateTime)
bibo:doi	10.1016/j.virusres.2006.12.006
bibo:pmid	17275120
has license	els-covid
sha1sum (hex)	35d222e3fd902819dc0a4d4059c05708164c1789
schema:url	https://doi.org/10.1016/j.virusres.2006.12.006
resource representing a document's title	Molecular characterisation of the virulent canine coronavirus CB/05 strain
has PubMed Central identifier	PMC7114338
has PubMed identifier	17275120
schema:publication	Virus Research
resource representing a document's body	covid:35d222e3fd902819dc0a4d4059c05708164c1789#body_text
is schema:about of	named entity 'Sequence analysis' named entity 'frame shift' named entity 'virulent' named entity 'envelope' named entity 'viral' named entity 'membrane' named entity 'titres' named entity 'canine' named entity 'introduced' named entity 'common' named entity 'protein' named entity 'transmissible' named entity 'internal organs' named entity 'viral RNA' named entity 'RNA' named entity 'spike (S) protein' named entity 'real-time RT-PCR' named entity 'pathogens' named entity 'stop codon' named entity 'Sequence analysis' named entity 'Molecular characterisation' named entity 'feline coronavirus' named entity 'type II' named entity 'kidney' named entity 'Molecular methods' named entity 'genome' named entity 'genotypes' named entity 'fibroma' named entity 'protein' named entity 'N-glycosylation' named entity 'FIPV' named entity 'antigen' named entity 'amino acid sequences' named entity 'cell cultures' named entity 'lymphoid tissues' named entity 'CDV' named entity 'Applera' named entity 'porcine epidemic diarrhoea' named entity 'Viral' named entity 'TGEV' named entity 'leukopenia' named entity 'ORFs' named entity 'Walter Reed' named entity 'viral pathogens' named entity 'nucleoprotein' named entity 'real-time RT-PCR' named entity 'spike protein' named entity 'phylogeny' named entity 'N-terminus' named entity 'bronchopneumonia' named entity 'nucleoprotein' named entity 'diarrhoea' named entity 'thymus' named entity 'coronavirus' named entity 'protein' named entity 'infection' named entity 'Milan' named entity 'untranslated region' named entity 'intestinal mucosa' named entity 'systemic disease' named entity 'ORF' named entity 'statistical support' named entity 'protein' named entity 'small intestine' named entity 'foetus' named entity 'Real-time PCR' named entity 'nsp' named entity 'RNA' named entity 'mesenteric lymph nodes' named entity 'virulence' named entity 'lungs' named entity 'membrane protein' named entity 'nucleotide' named entity 'kidneys'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software