About: Recombinant Canine Coronaviruses in Dogs, Europe

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An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Recombinant Canine Coronaviruses in Dogs, Europe
Creator	Buonavoglia, Canio Decaro, Nicola Elia, Gabriella Mari, Viviana Martella, Vito Camero, Michele Addie, Diane Lucente, Maria
Source	Medline; PMC
abstract	Coronaviruses of potential recombinant origin with porcine transmissible gastroenteritis virus (TGEV), referred to as a new subtype (IIb) of canine coronavirus (CCoV), were recently identified in dogs in Europe. To assess the distribution of the TGEV-like CCoV subtype, during 2001–2008 we tested fecal samples from dogs with gastroenteritis. Of 1,172 samples, 493 (42.06%) were positive for CCoV. CCoV-II was found in 218 samples, and CCoV-I and CCoV-II genotypes were found in 182. Approximately 20% of the samples with CCoV-II had the TGEV-like subtype; detection rates varied according to geographic origin. The highest and lowest rates of prevalence for CCoV-II infection were found in samples from Hungary and Greece (96.87% and 3.45%, respectively). Sequence and phylogenetic analyses showed that the CCoV-IIb strains were related to prototype TGEV-like strains in the 5′ and the 3′ ends of the spike protein gene.
has issue date	2010-01-01(xsd:dateTime)
bibo:doi	10.3201/eid1601.090726
bibo:pmid	20031041
has license	no-cc
sha1sum (hex)	0312582594429d880453377773c1925f5b65682b
schema:url	https://doi.org/10.3201/eid1601.090726
resource representing a document's title	Recombinant Canine Coronaviruses in Dogs, Europe
has PubMed Central identifier	PMC2874359
has PubMed identifier	20031041
schema:publication	Emerg Infect Dis
resource representing a document's body	covid:0312582594429d880453377773c1925f5b65682b#body_text
is schema:about of	named entity '2001' named entity 'origin' named entity 'Canine' named entity 'EUROPE' named entity 'PORCINE TRANSMISSIBLE GASTROENTERITIS VIRUS' named entity 'HUNGARY' named entity 'STRAINS' named entity 'ACCORDING' named entity 'REFERRED TO' named entity 'DETECTION' named entity 'NEW' named entity 'FOUND' named entity '2896' named entity 'APPROXIMATELY' named entity 'RATES' named entity 'SPIKE PROTEIN' named entity 'ENDS' named entity 'LOWEST' named entity 'IIB' named entity 'FECAL' named entity 'PROTEIN GENE' named entity 'POSITIVE FOR' covid:arg/0312582594429d880453377773c1925f5b65682b named entity '20%' named entity 'DISTRIBUTION' named entity 'RECENTLY' named entity 'INFECTION' named entity 'GASTROENTERITIS' named entity '80%' named entity 'CANINE' named entity 'RECOMBINANT' named entity 'CORONAVIRUSES' named entity 'DOGS' named entity 'HIGHEST' named entity 'DOGS' named entity 'PROTOTYPE' named entity 'POTENTIAL' named entity 'GEOGRAPHIC' named entity 'ORIGIN' named entity '218' named entity 'TESTED' named entity 'RECOMBINANT' named entity 'GREECE' named entity 'SUBTYPE' named entity 'PREVALENCE' named entity 'GENOTYPES' named entity 'CORONAVIRUSES' named entity 'CANINE CORONAVIRUS' named entity 'ASSESS' named entity 'LIKE' named entity 'RELATED' named entity 'SAMPLES' named entity 'EUROPE' named entity 'SEQUENCE' named entity 'ends' named entity 'prototype' named entity 'phylogenetic' named entity 'gastroenteritis' named entity 'porcine' named entity 'TGEV' named entity 'Coronaviruses' named entity 'Recombinant' named entity 'Slovenia' named entity 'Italy' named entity 'Invitrogen' named entity 'nucleotide sequences' named entity 'Portugal' named entity 'host range' named entity 'cation' named entity 'reference group' named entity 'Italy' named entity 'Italy' named entity 'spike protein' named entity 'oligonucleotide'

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